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The Best Natural Toilet Bowl Cleaner

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Cleaning the toilet sounds like a dreadful chore, especially when grime and limescale have built up inside it. However, cleaning and maintaining the toilet in pristine condition is not as hard as it seems to be.

Toilet cleaning becomes a lot easier when you have the right cleaning products. You should look for a natural toilet bowl cleaner so that it doesn’t just keep the toilet clean but is also safe for you and the environment.

It is best to avoid synthetic toilet cleaners that smell bad and contain toxic chemicals and other harmful ingredients. Luckily, there are a number of nontoxic products are available in the market today that are powerful plant-based cleaners.

To make it easy for you, we have compiled a list of the best natural toilet bowl cleaners that will keep your toilet sparkly clean.

Related: The Best Toilet Brushes

ImageProductOur RatingPrice
Method Antibacterial Toilet Bowl CleanerMethod Antibacterial Toilet Bowl Cleaner
  • 2 pack, spearmint antibacterial toilet cleaner
  • Kills 99.9% of household germs
9.5
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Seventh Generation Toilet Bowl CleanerSeventh Generation Toilet Bowl Cleaner
  • 8 pack, natural toilet bowl cleaner
  • Non-toxic, septic safe, biodegradable, and no harmful residues
  • Emerald Cypress and Fir Scent
9.4
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Mrs. Meyer’s Clean Day Liquid Toilet Bowl CleanerMrs. Meyer’s Clean Day Liquid Toilet Bowl Cleaner
  • Lavender scented toilet bowl cleaner formulated with plant-derived ingredients 
  • Biodegradable and septic safe
  • Cruelty-free and Leaping Bunny Certified
9.4
Check Price on Amazon

The Best Natural Toilet Bowl Cleaner

1. Method Antibacterial Toilet Bowl Cleaner

Method Antibacterial Toilet Bowl Cleaner - Spearmint - 24 Ounce - 2 PackMethod Antibacterial Toilet Bowl Cleaner – Spearmint – 24 Ounce – 2 Pack

The Method antibacterial toilet bowl cleaner packs a strong disinfecting jolt with citric acid that removes grime and kills germs at the same time. This eco-friendly toilet cleaner uses nature’s power to kill 99.9% of household germs such as staphylococcus aureus, influenza a flu virus, rhinovirus, escherichia coli, enterobacter aerogenes, and salmonella enterica.

This cleaner features power green technology that utilizes the cleaning properties of nature-based cleaning agents. The lactic acid and cornstarch-based decyl glucoside don’t just eliminate soap scum and lime deposits but also prevent them.

In a nutshell, the following features make the Method Antibacterial toilet cleaner the best natural toilet bowl cleaner for your bathroom:

  • A natural biodegradable formula that has a pleasant spearmint smell.
  • A powerful antibacterial cleaner.
  • Kills 99.9% of household germs including staphylococcus aureus, influenza a flu virus, rhinovirus, Escherichia coli, enterobacter aerogenes, and salmonella enterica.
  • Features a non-toxic formula free of bleach, phthalates, propyl-paraben & butyl-paraben, and sodium Laureth sulfate (SLES).
  • This product is cruelty-free and comes in a 75% recycled plastic bottle.
  • A hypoallergenic formula that minimizes the risk of an allergic response.

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2. Seventh Generation Toilet Bowl Cleaner

Seventh Generation Toilet Bowl Cleaner, Emerald Cypress & Fir Scent, 32-Ounces Bottle (Pack of 8)Seventh Generation Toilet Bowl Cleaner, Emerald Cypress & Fir Scent, 32-Ounces Bottle (Pack of 8)

The Seventh Generation Toilet Bowl Cleaner contains a naturally derived non-toxic formula that is safe and effective. This cleaner will remove stubborn stains and clean the toilet bowl without releasing harsh fumes.

Not only will it clean the toilet bowl, but this cleaner will also fill up your washroom with a refreshing scent of Emerald Cypress and Fir from the pure essential oils and botanical extracts present in its formula.

The Seventh Generation Toilet bowl cleaner is a USDA Certified Bio-based 97 percent product and Leaping Bunny Certified as well. The packaging of this product has been made from 100% post-consumer recycled plastic (excluding the colorant).

  • Harsh on dirt but gentle on the environment.
  • Does not contain chlorine, ammonia, strong acids, or petroleum-based ingredients.
  • USDA certified 97% plant-based formula is non-toxic, biodegradable, and eco-friendly.
  • Cleans effectively without leaving behind any harmful residues.
  • This cleaner does not release unpleasant fumes.
  • A U.S. EPA Safer Choice certified product – which means that it contains ingredients that are safer for humans and the environment.

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3. Mrs. Meyer’s Clean Day Liquid Toilet Bowl Cleaner

Mrs. Meyer’s Clean Day Liquid Toilet Bowl Cleaner, Lavender Scent, 24 ounce bottleMrs. Meyer’s Clean Day Liquid Toilet Bowl Cleaner, Lavender Scent, 24-ounce bottle

Mrs. Meyer’s Clean Day liquid toilet bowl cleaner features effective and powerful natural cleaning agents such as lactic acid. It cleans up the toilet bowl efficiently and fills up your washroom with a clean and pleasant lavender scent.

The plant-based cleaning ingredients and essential oils in this product clean and deodorize the toilet effectively without the use of harsh chemicals like phthalates, chlorine, or mineral acids.

One of the natural ingredients present in this product is lactic acid which is a remarkable antimicrobial and descaling agent used in cleaning products. Another notable ingredient is alcohol ethoxylate which is a surfactant that enhances the cleaning performance of this toilet bowl cleaner.

At a glance, this cleaner stands out for offering the following cleaning benefits for your toilet:

  • Features a biodegradable, effective toilet cleaner formula that removes stains and deodorizes the toilet.
  • Contains essential oils and plant-derived chemicals instead of harsh chemicals.
  • Carefully chosen, green ingredients such as lactic acids.
  • No phthalates, chlorine, or harsh mineral acids.
  • Septic safe formula.
  • Leaping Bunny Certified – ensures that the product is cruelty-free.

Related: The Best Natural Shower Cleaner: Non-Toxic Soap Scum Remover

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4. Better Life Natural Toilet Bowl Cleaner

Better Life Natural Toilet Bowl Cleaner, 24 Ounce (Pack of 2) Tea Tree & Peppermint ScentBetter Life Natural Toilet Bowl Cleaner, 24 Ounce (Pack of 2) Tea Tree & Peppermint Scent

The Better Life natural toilet bowl cleaner features powerful, plant-based cleaning agents that eliminate all kinds of stinky messes leaving your toilet bowl looking and smelling fresh and clean.

No harsh chemicals are present in the naturally derived formula of this toilet cleaner. It has been made using plant-based cleaning ingredients derived from corn and coconut that are powerful and effective.  

This cleaner will remove soap scum, calcium deposits, lime, rust, and hard water stains from your toilet bowl. The lactic acid and citric acid present in the formula kill bacteria and some fungi as well to sanitize, disinfect, and clean the toilet.

This Toilet Bowl Cleaner is tough on stains but gentle on the environment. The following features make this cleaner a good choice for your toilet:

  • Plant-Based Cleaning Agents are derived from citrus, corn, and coconut.
  • Delivers a powerful clean, naturally leaving your toilet sparkling clean and smelling fresh without the use of toxic chemicals.
  • This cleaner will effectively remove soap scum, calcium deposits, lime, rust, and hard water stains from your toilet bowl.
  • Safe for septic systems.
  • Cruelty-Free: Better Life is a Leaping Bunny-certified company.

Related: The Best Septic Safe Toilet Cleaners

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5. Eco-Me Natural Toilet Bowl Cleaner

Eco-me Natural Powerful Toilet Bowl Cleaner, Clear, Herbal Mint, 32 Fl OzEco-me Natural Powerful Toilet Bowl Cleaner, Clear, Herbal Mint, 32 Fl Oz

Eco-Me toilet bowl cleaner is a natural and powerful toilet bowl cleaner that cleans and deodorizes the toilet bowl with plant-based essential oils and antibacterial compounds.

This is a green toilet bowl cleaner that ensures that your toilet looks sparkling clean without releasing harsh fumes. The natural formula of this product makes it suitable for homes that have children or pets.

The formula of this cleaner does not have ammonia, bleach, or synthetic fragrance. It is a septic-safe and eco-friendly toilet bowl cleaner that is green seal certified. Green Seal is a premier ecolabel that ensures that products meet rigorous standards for environmental protection.  

The following key features of this product have put it on our list of the best natural toilet bowl cleaners:

  • Features a non-toxic formula that contains plant-based cleaners, disinfectants, and essential oils.
  • No ammonia, bleach, or synthetic fragrance are present in the formula.
  • This eco-friendly cleaner is Green Seal certified.

Related: The Best Natural All-Purpose Cleaner

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6. Ecover Toilet Bowl Cleaner

Ecover Toilet Bowl Cleaner, Pine Fresh, 25 OunceEcover Toilet Bowl Cleaner, Pine Fresh, 25 Ounce

The Ecover Toilet Bowl cleaner has been formulated with eco-friendly, plant-based ingredients that clean, decalcify and freshen your toilet bowl without creating toxic, foul-smelling fumes. Brushing your toilet with the Ecover Toilet bowl cleaner will leave behind a sparkling shine and a fresh scent. The formula contains citric acid and a natural surfactant for grime and limescale removal.

This natural cleaner offers the following benefits:

  • Contains plant and mineral-based ingredients.
  • Effectively removes stains, decalcifies, and freshens the toilet.
  • The 100% recyclable bottle of this product has been made from 100% plant plastic.
  • Cruelty-free – This product has not been tested on animals.
  • The formula is safe for septic tanks.

Related: How to Clean a Bathtub Without Harsh Chemicals

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ImageProductOur RatingPrice
Method Antibacterial Toilet Bowl CleanerMethod Antibacterial Toilet Bowl Cleaner
  • 2 pack, spearmint antibacterial toilet cleaner
  • Kills 99.9% of household germs
9.5
Check Price on Amazon
Seventh Generation Toilet Bowl CleanerSeventh Generation Toilet Bowl Cleaner
  • 8 pack, natural toilet bowl cleaner
  • Non-toxic, septic safe, biodegradable, and no harmful residues
  • Emerald Cypress and Fir Scent
9.4
Check Price on Amazon
Mrs. Meyer’s Clean Day Liquid Toilet Bowl CleanerMrs. Meyer’s Clean Day Liquid Toilet Bowl Cleaner
  • Lavender scented toilet bowl cleaner formulated with plant-derived ingredients 
  • Biodegradable and septic safe
  • Cruelty-free and Leaping Bunny Certified
9.4
Check Price on Amazon

Final Thoughts on the Best Natural Toilet Bowl Cleaner

Most of the typical toilet bowl cleaners are made from corrosive, harsh ingredients such as hydrochloric acid (HCL) and chlorine bleach that are harmful to human health and the environment. Ingredients such as HCL, ammonia, or bleach can irritate your eyes, skin, and respiratory tract. Also, they can prove to be fatal if swallowed.

Traditional cleaning products also tend to contain phosphates that contribute to the growth of algal blooms that are harmful to sea life. As a result of raising awareness about eco-friendly products, many natural toilet-bowl cleaners have emerged in the market. They are a safer replacement for harsh chemical cleaners.

The natural toilet cleaners contain plant- and mineral-based ingredients that are non-toxic, eco-friendly, and biodegradable. The natural formula is usually hypoallergenic, triclosan-free, and paraben-free.

All the products on our best natural toilet bowl cleaner list are excellent products for your home. They clean the toilet bowl effectively without creating toxic fumes and are gentle on your skin and the environment.